Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | FD721_02040 | Not Available | Negative | 427715 - 429772 | 78172.5 |
| hypothetical protein | FD721_02050 | Not Available | Negative | 430503 - 430967 | 17673.2 |
| hypothetical protein | FD721_02055 | Not Available | Negative | 431005 - 431301 | 11018.7 |
| hypothetical protein | FD721_02060 | Not Available | Negative | 431524 - 431907 | 14322.9 |
| phosphoglucomutase/phosphomannomutase family protein | FD721_02065 | Not Available | Negative | 432203 - 433615 | 51960.2 |
| n,n'-diacetylchitobiose phosphorylase | FD721_02070 | Not Available | Negative | 433676 - 436081 | 89956.6 |
| beta-hexosaminidase | FD721_02075 | Not Available | Negative | 436114 - 438051 | 73345.2 |
| n-acetylglucosamine kinase | FD721_02080 | Not Available | Negative | 438053 - 438946 | 31428.7 |
| chitobiase | FD721_02085 | Not Available | Negative | 438939 - 440678 | 65686.3 |
| abc transporter atp-binding protein | FD721_02090 | Not Available | Negative | 440774 - 441775 | 37339.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
