Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | FD721_01990 | Not Available | Negative | 412575 - 414899 | 89904.4 |
| hypothetical protein | FD721_01995 | Not Available | Positive | 415192 - 415959 | 28151.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FD721_02000 | Not Available | Positive | 416168 - 417271 | 41696.6 |
| trimethylamine n-oxide reductase system protein tore | FD721_02005 | Not Available | Positive | 417760 - 417936 | 6571.19 |
| pentaheme c-type cytochrome torc | FD721_02010 | Not Available | Positive | 417974 - 419152 | 44111.9 |
| trimethylamine-n-oxide reductase tora | FD721_02015 | Not Available | Positive | 419173 - 421635 | 92772.0 |
| alanine:cation symporter family protein | FD721_02020 | Not Available | Negative | 421698 - 423251 | 55051.6 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | FD721_02025 | Not Available | Negative | 423560 - 425008 | 52694.0 |
| 6-phosphogluconolactonase | FD721_02030 | Not Available | Negative | 425019 - 425735 | 26695.6 |
| glucose-6-phosphate dehydrogenase | FD721_02035 | Not Available | Negative | 425738 - 427237 | 56733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
