Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | FD721_00160 | Not Available | Positive | 29847 - 30809 | 35257.4 |
| dsba family protein | FD721_00165 | Not Available | Positive | 30822 - 31697 | 32352.2 |
| hypothetical protein | FD721_00170 | Not Available | Positive | 31716 - 32513 | 29087.7 |
| qnr family pentapeptide repeat protein | FD721_00175 | Not Available | Negative | 32587 - 33243 | 24926.3 |
| hypothetical protein | FD721_00180 | Not Available | Positive | 33865 - 34833 | 34935.4 |
| hypothetical protein | FD721_00185 | Not Available | Positive | 35018 - 35440 | 15551.6 |
| nuclease | FD721_00190 | Not Available | Positive | 35451 - 35960 | 19388.4 |
| hypothetical protein | FD721_00195 | Not Available | Positive | 36002 - 36472 | 17706.2 |
| hypothetical protein | FD721_00200 | Not Available | Negative | 36477 - 36752 | 10246.7 |
| site-specific dna-methyltransferase | FD721_00205 | Not Available | Positive | 37132 - 38385 | 46715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
