Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2256 domain-containing protein | FD721_01940 | Not Available | Positive | 400834 - 401013 | 7313.96 |
| helix-turn-helix transcriptional regulator | FD721_01945 | Not Available | Negative | 400970 - 401263 | 10508.7 |
| permease | FD721_01950 | Not Available | Positive | 401449 - 402522 | 38552.8 |
| rida family protein | FD721_01955 | Not Available | Negative | 402581 - 403054 | 17004.4 |
| divalent metal cation transporter | FD721_01960 | Not Available | Positive | 403352 - 404584 | 43176.2 |
| sulp family inorganic anion transporter | FD721_01965 | Not Available | Negative | 404705 - 406426 | 61853.1 |
| nad(p)/fad-dependent oxidoreductase | FD721_01970 | Not Available | Positive | 407281 - 408492 | 44302.4 |
| nad(p)/fad-dependent oxidoreductase | FD721_01975 | Not Available | Positive | 408760 - 409983 | 44752.8 |
| s-(hydroxymethyl)glutathione synthase | FD721_01980 | Not Available | Positive | 410126 - 410698 | 20594.5 |
| dicarboxylate/amino acid:cation symporter | FD721_01985 | Not Available | Positive | 411220 - 412473 | 44037.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
