Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase i | FD721_01820 | Not Available | Positive | 370889 - 372103 | 42855.1 |
| pp_00362 | FD721_01825 | Not Available | Positive | 372406 - 372759 | Not Available |
| gnat family n-acetyltransferase | FD721_01830 | Not Available | Positive | 372815 - 373285 | 17641.1 |
| hypothetical protein | FD721_01835 | Not Available | Positive | 373297 - 373773 | 18197.6 |
| peptidyl-prolyl cis-trans isomerase | FD721_01840 | Not Available | Negative | 373889 - 374380 | 17932.3 |
| nadh:flavin oxidoreductase | FD721_01845 | Not Available | Positive | 374730 - 375833 | 41420.3 |
| duf1456 family protein | FD721_01850 | Not Available | Positive | 375935 - 376414 | 18815.5 |
| transporter | FD721_01855 | Not Available | Negative | 376580 - 378667 | 78658.2 |
| uroporphyrinogen-iii c-methyltransferase | FD721_01870 | Not Available | Positive | 380932 - 381759 | 30331.8 |
| anaerobic sulfite reductase subunit asra | FD721_01875 | Not Available | Positive | 381759 - 382805 | 40213.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
