Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer atpase trbb | FD721_01670 | Not Available | Positive | 334503 - 335444 | 35166.3 |
| hypothetical protein | FD721_01675 | Not Available | Positive | 335689 - 335907 | 8048.72 |
| p-type conjugative transfer protein trbl | FD721_01680 | Not Available | Positive | 335916 - 337211 | 45044.3 |
| type iv secretion system protein | FD721_01685 | Not Available | Positive | 337249 - 337920 | 25205.5 |
| p-type conjugative transfer protein trbg | FD721_01690 | Not Available | Positive | 337920 - 338792 | 32258.2 |
| hypothetical protein | FD721_01695 | Not Available | Positive | 338789 - 339214 | 15872.2 |
| hypothetical protein | FD721_01700 | Not Available | Positive | 339204 - 340391 | 42264.1 |
| hypothetical protein | FD721_01705 | Not Available | Positive | 340405 - 341337 | 34206.5 |
| type ii and iii secretion system protein | FD721_01710 | Not Available | Positive | 341337 - 342797 | 52519.6 |
| hypothetical protein | FD721_01715 | Not Available | Positive | 342794 - 343927 | 42033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
