Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | FD721_01620 | Not Available | Negative | 326502 - 327134 | 23800.0 |
| tray domain-containing protein | FD721_01625 | Not Available | Positive | 327311 - 327502 | 7135.38 |
| hypothetical protein | FD721_01630 | Not Available | Positive | 327809 - 328222 | 15932.4 |
| hypothetical protein | FD721_01635 | Not Available | Positive | 328454 - 329050 | 22789.4 |
| hypothetical protein | FD721_01640 | Not Available | Positive | 329802 - 330140 | 13260.0 |
| conjugal transfer protein trbc | FD721_01645 | Not Available | Positive | 330209 - 330529 | 10995.0 |
| conjugal transfer protein trbd | FD721_01650 | Not Available | Positive | 330539 - 330826 | 10910.5 |
| conjugal transfer protein trbe | FD721_01655 | Not Available | Positive | 330828 - 333230 | 90184.7 |
| p-type conjugative transfer protein trbj | FD721_01660 | Not Available | Positive | 333223 - 333999 | 29074.1 |
| hypothetical protein | FD721_01665 | Not Available | Positive | 334015 - 334380 | 13974.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
