Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_01570 | Not Available | Positive | 316388 - 316813 | 15711.7 |
| ribosome biogenesis gtpase ylqf | FD721_01575 | Not Available | Negative | 316885 - 317838 | 36269.9 |
| macro domain-containing protein | FD721_01580 | Not Available | Negative | 318104 - 318616 | 18199.0 |
| hypothetical protein | FD721_01585 | Not Available | Negative | 318613 - 319539 | 36398.6 |
| inovirus gp2 family protein | FD721_01590 | Not Available | Positive | 320006 - 320671 | 25755.6 |
| hypothetical protein | FD721_01595 | Not Available | Negative | 320750 - 322192 | 53954.9 |
| hypothetical protein | FD721_01600 | Not Available | Positive | 323114 - 323545 | 17124.8 |
| hypothetical protein | FD721_01605 | Not Available | Negative | 323656 - 323910 | 9861.72 |
| dini family protein | FD721_01610 | Not Available | Negative | 324195 - 324440 | 9289.11 |
| hypothetical protein | FD721_01615 | Not Available | Negative | 325242 - 326075 | 32428.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
