Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin/lipoyl-binding protein | FD721_01520 | Not Available | Positive | 303922 - 304896 | 36010.0 |
| abc transporter permease | FD721_01525 | Not Available | Positive | 304901 - 306082 | 44532.9 |
| abc transporter permease | FD721_01530 | Not Available | Positive | 306079 - 307230 | 43009.2 |
| hypothetical protein | FD721_01535 | Not Available | Positive | 307398 - 307751 | 12559.9 |
| ubiquinone-dependent pyruvate dehydrogenase | FD721_01540 | Not Available | Positive | 307951 - 309669 | 62360.9 |
| alpha-hydroxy-acid oxidizing protein | FD721_01545 | Not Available | Negative | 309751 - 310914 | 43258.7 |
| hypothetical protein | FD721_01550 | Not Available | Positive | 311280 - 311540 | 9596.58 |
| helix-turn-helix domain-containing protein | FD721_01555 | Not Available | Negative | 311624 - 312607 | 37092.4 |
| beta-ketoacyl synthase | FD721_01560 | Not Available | Positive | 312766 - 314622 | 66188.5 |
| dead/deah box helicase | FD721_01565 | Not Available | Negative | 314762 - 316054 | 48328.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
