Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parm/stba family protein | FD721_00105 | Not Available | Negative | 21459 - 22436 | 35226.4 |
| hypothetical protein | FD721_00110 | Not Available | Positive | 22909 - 23463 | 21752.8 |
| hypothetical protein | FD721_00115 | Not Available | Positive | 23488 - 23778 | 10741.2 |
| hypothetical protein | FD721_00125 | Not Available | Positive | 25465 - 26316 | 30987.3 |
| hypothetical protein | FD721_00130 | Not Available | Positive | 26371 - 26760 | 14698.5 |
| hypothetical protein | FD721_00135 | Not Available | Positive | 26750 - 27154 | 15253.3 |
| hypothetical protein | FD721_00140 | Not Available | Positive | 27328 - 27849 | 20216.0 |
| hypothetical protein | FD721_00145 | Not Available | Positive | 27931 - 28404 | 17150.2 |
| hypothetical protein | FD721_00150 | Not Available | Positive | 28415 - 28708 | 10653.7 |
| hypothetical protein | FD721_00155 | Not Available | Positive | 28714 - 29844 | 42628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
