Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | FD721_01420 | Not Available | Positive | 278766 - 282311 | 135262.0 |
| hypothetical protein | FD721_01425 | Not Available | Positive | 282327 - 283787 | 54937.7 |
| type vi secretion system paar protein | FD721_01430 | Not Available | Positive | 283835 - 284119 | 9331.07 |
| oxidase | FD721_01435 | Not Available | Negative | 284163 - 284744 | 21516.6 |
| hypothetical protein | FD721_01440 | Not Available | Negative | 284909 - 285109 | 7900.35 |
| histidine phosphatase family protein | FD721_01445 | Not Available | Positive | 285305 - 285886 | 21796.8 |
| hypothetical protein | FD721_01450 | Not Available | Positive | 286049 - 286687 | 23222.9 |
| hypothetical protein | FD721_01455 | Not Available | Positive | 286728 - 287084 | 13214.7 |
| alpha/beta hydrolase | FD721_01460 | Not Available | Positive | 287322 - 288317 | 36657.8 |
| d-alanyl-d-alanine endopeptidase | FD721_01465 | Not Available | Negative | 288358 - 289320 | 35106.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
