Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapc | FD721_01320 | Not Available | Negative | 250736 - 251275 | 20362.3 |
| quinone-dependent dihydroorotate dehydrogenase | FD721_01325 | Not Available | Negative | 251465 - 252478 | 36773.6 |
| duf2835 family protein | FD721_01330 | Not Available | Negative | 252692 - 252916 | 8635.47 |
| aminopeptidase n | FD721_01335 | Not Available | Negative | 253009 - 255633 | 99554.4 |
| nicotinate phosphoribosyltransferase | FD721_01340 | Not Available | Positive | 255934 - 257133 | 45365.6 |
| lipocalin family protein | FD721_01345 | Not Available | Negative | 257220 - 257882 | 25277.7 |
| carboxy terminal-processing peptidase | FD721_01350 | Not Available | Negative | 258073 - 260082 | 75269.4 |
| rna chaperone proq | FD721_01355 | Not Available | Negative | 260099 - 260731 | 23607.3 |
| gaf domain-containing protein | FD721_01360 | Not Available | Negative | 260842 - 261300 | 16718.2 |
| abc transporter atp-binding protein | FD721_01365 | Not Available | Positive | 261388 - 263193 | 67061.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
