Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | FD721_01270 | Not Available | Negative | 239251 - 239649 | 13998.7 |
| duf3634 family protein | FD721_01275 | Not Available | Negative | 239649 - 239954 | 11747.8 |
| macrodomain ter protein matp | FD721_01280 | Not Available | Negative | 240109 - 240564 | 17736.1 |
| lon protease family protein | FD721_01285 | Not Available | Positive | 240765 - 242507 | 64483.7 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | FD721_01290 | Not Available | Positive | 242577 - 243092 | 18985.1 |
| ribosome modulation factor | FD721_01295 | Not Available | Negative | 243285 - 243458 | 6606.77 |
| duf3466 family protein | FD721_01300 | Not Available | Negative | 243617 - 245638 | 73268.0 |
| abc transporter atp-binding protein | FD721_01305 | Not Available | Negative | 245638 - 247566 | 72825.4 |
| glutaredoxin family protein | FD721_01310 | Not Available | Negative | 247553 - 247816 | 9842.76 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | FD721_01315 | Not Available | Negative | 247816 - 249960 | 80982.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
