Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | FD721_01170 | Not Available | Positive | 220179 - 220781 | 21700.9 |
| ydiu family protein | FD721_01175 | Not Available | Negative | 220841 - 222316 | 56029.6 |
| class a beta-lactamase | FD721_01180 | Not Available | Positive | 222514 - 223380 | 31513.9 |
| iron abc transporter permease | FD721_01185 | Not Available | Positive | 223568 - 224614 | 36737.8 |
| abc transporter atp-binding protein | FD721_01190 | Not Available | Positive | 224619 - 225413 | 29953.4 |
| abc transporter substrate-binding protein | FD721_01195 | Not Available | Positive | 225410 - 226432 | 37883.0 |
| hypothetical protein | FD721_01200 | Not Available | Positive | 226583 - 226963 | 14370.6 |
| phosphorylase | FD721_01205 | Not Available | Positive | 226987 - 227793 | 30701.5 |
| arylesterase | FD721_01210 | Not Available | Negative | 228345 - 228947 | 22554.8 |
| abc transporter atp-binding protein | FD721_01215 | Not Available | Positive | 228946 - 229626 | 24432.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
