Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor n(5)-glutamine methyltransferase | FD721_01120 | Not Available | Negative | 210607 - 211455 | 30896.8 |
| peptide chain release factor 1 | FD721_01125 | Not Available | Negative | 211457 - 212545 | 40658.8 |
| glutamyl-trna reductase | FD721_01130 | Not Available | Negative | 212715 - 213968 | 45739.8 |
| outer membrane lipoprotein lolb | FD721_01135 | Not Available | Positive | 214229 - 214882 | 24634.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | FD721_01140 | Not Available | Positive | 214897 - 215766 | 31672.8 |
| ribose-phosphate pyrophosphokinase | FD721_01145 | Not Available | Positive | 215799 - 216746 | 34340.4 |
| aminoacyl-trna hydrolase | FD721_01150 | Not Available | Positive | 217063 - 217653 | 21494.0 |
| redox-regulated atpase ychf | FD721_01155 | Not Available | Positive | 217715 - 218806 | 39702.7 |
| Trna-met | Not Available | Not Available | Positive | 219139 - 219215 | Not Available |
| hydrogenase nickel incorporation protein hypb | FD721_01165 | Not Available | Positive | 219237 - 220024 | 29014.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
