Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 199899 - 199975 | Not Available |
| lyse family translocator | FD721_01075 | Not Available | Negative | 200050 - 200664 | 21604.2 |
| cys-trna(pro) deacylase | FD721_01080 | Not Available | Negative | 200728 - 201207 | 16842.4 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | FD721_01085 | Not Available | Negative | 201350 - 203017 | 61215.6 |
| na+/h+ antiporter nhac family protein | FD721_01090 | Not Available | Negative | 203302 - 204660 | 47165.5 |
| methyl-accepting chemotaxis protein | FD721_01095 | Not Available | Positive | 204963 - 206846 | 68144.9 |
| haaap family serine/threonine permease | FD721_01100 | Not Available | Negative | 206943 - 208202 | 46058.5 |
| 3-deoxy-8-phosphooctulonate synthase | FD721_01105 | Not Available | Negative | 208494 - 209348 | 31265.7 |
| tetratricopeptide repeat protein | FD721_01110 | Not Available | Negative | 209363 - 210172 | 31248.2 |
| invasion protein | FD721_01115 | Not Available | Negative | 210214 - 210594 | 13850.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
