Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | FD721_00055 | Not Available | Positive | 10209 - 11723 | 57822.0 |
| conjugal transfer protein traf | FD721_00060 | Not Available | Positive | 11831 - 12847 | 37828.6 |
| conjugal transfer protein trah | FD721_00065 | Not Available | Positive | 12849 - 14288 | 51884.8 |
| conjugal transfer protein trag | FD721_00070 | Not Available | Positive | 14295 - 17936 | 129088.0 |
| hypothetical protein | FD721_00075 | Not Available | Negative | 17987 - 18373 | 14080.8 |
| transcriptional regulator | FD721_00080 | Not Available | Positive | 19076 - 19333 | 10121.1 |
| lytic transglycosylase domain-containing protein | FD721_00085 | Not Available | Positive | 19379 - 19921 | 19487.3 |
| hypothetical protein | FD721_00090 | Not Available | Positive | 19947 - 20528 | 21479.5 |
| regulator | FD721_00095 | Not Available | Positive | 20518 - 21093 | 21596.8 |
| hypothetical protein | FD721_00100 | Not Available | Negative | 21170 - 21445 | 10397.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
