Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_00915 | Not Available | Positive | 172423 - 172698 | 10454.7 |
| hypothetical protein | FD721_00920 | Not Available | Negative | 172735 - 173829 | 41774.4 |
| hypothetical protein | FD721_00925 | Not Available | Positive | 174061 - 174303 | 8744.66 |
| hypothetical protein | FD721_00930 | Not Available | Positive | 174323 - 174583 | 9118.54 |
| hypothetical protein | FD721_00935 | Not Available | Positive | 174693 - 175448 | 28139.8 |
| nyn domain-containing protein | FD721_00940 | Not Available | Positive | 175511 - 176233 | 27496.6 |
| hypothetical protein | FD721_00945 | Not Available | Positive | 177033 - 177509 | 17794.2 |
| autonomous glycyl radical cofactor grca | FD721_00950 | Not Available | Negative | 177937 - 178203 | 9946.53 |
| type ii secretion system protein | FD721_00955 | Not Available | Positive | 178204 - 178561 | 13446.0 |
| hypothetical protein | FD721_00960 | Not Available | Positive | 178577 - 178930 | 13540.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
