Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_00765 | Not Available | Positive | 148574 - 148912 | 12631.0 |
| dna cytosine methyltransferase | FD721_00770 | Not Available | Positive | 148974 - 150608 | 60098.1 |
| hypothetical protein | FD721_00780 | Not Available | Positive | 151814 - 152107 | 11114.1 |
| hypothetical protein | FD721_00785 | Not Available | Positive | 152402 - 152815 | 15741.8 |
| hypothetical protein | FD721_00790 | Not Available | Positive | 153248 - 153679 | 16397.1 |
| hypothetical protein | FD721_00795 | Not Available | Positive | 153747 - 153995 | 9464.79 |
| hypothetical protein | FD721_00800 | Not Available | Positive | 154111 - 154293 | 6527.19 |
| 5'-deoxynucleotidase | FD721_00805 | Not Available | Positive | 154579 - 155418 | 30682.7 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | FD721_00810 | Not Available | Positive | 155415 - 155648 | 8983.41 |
| hypothetical protein | FD721_00815 | Not Available | Positive | 155711 - 156118 | 14599.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
