Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_00615 | Not Available | Positive | 121208 - 121528 | 11282.7 |
| s26 family signal peptidase | FD721_00620 | Not Available | Positive | 121525 - 122040 | 19452.6 |
| conjugal transfer protein traw | FD721_00625 | Not Available | Positive | 122015 - 123271 | 46851.5 |
| eal domain-containing protein | FD721_00630 | Not Available | Positive | 123268 - 123972 | 26188.6 |
| conjugal transfer protein trau | FD721_00635 | Not Available | Positive | 123969 - 124976 | 35892.9 |
| conjugal transfer mating pair stabilization protein tran | FD721_00640 | Not Available | Positive | 125172 - 127952 | 99483.3 |
| hypothetical protein | FD721_00645 | Not Available | Positive | 128168 - 129496 | 50433.6 |
| duf1845 domain-containing protein | FD721_00650 | Not Available | Negative | 129597 - 130247 | 24484.8 |
| hypothetical protein | FD721_00655 | Not Available | Positive | 130568 - 130891 | 11949.7 |
| hypothetical protein | FD721_00660 | Not Available | Positive | 131057 - 131278 | 7252.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
