Parasynechococcus marenigrum WH 8102

Gram-negativeCocciMotileFacultative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Prochlorococcaceae

Genus

Parasynechococcus

Description

Parasynechococcus marenigrum WH 8102 is a Gram-negative, coccoid bacterium that exists predominantly as single cells. This microorganism is characterized as a photoautotroph, deriving energy through photosynthesis, which allows it to thrive in various aquatic habitats. Its facultative oxygen requirement indicates that it can adapt to fluctuating oxygen levels, enabling it to inhabit diverse environmental niches, including both oxygen-rich and oxygen-poor aquatic systems. As a member of the photoautotrophic community, P. marenigrum WH 8102 plays a significant role in primary production within its ecosystem. By utilizing sunlight as an energy source, it contributes to the base of the food web, supporting a range of organisms that depend on organic matter generated through photosynthesis. Furthermore, its ability to tolerate varying oxygen levels suggests potential resilience to changing environmental conditions, making it an interesting subject for studies on microbial adaptation in aquatic ecosystems. This adaptability may also have implications for biogeochemical cycles, particularly in relation to carbon fixation and nutrient cycling in marine environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilyProchlorococcaceae
GenusParasynechococcus
SpeciesParasynechococcus marenigrum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourcePhotosynthetic - Photoautotroph
PathogenicityNot Available

Genome Summary

Parasynechococcus marenigrum WH 8102

Accession NumberNC_005070.1

Gene Summary

Adenine Count

491716 bp

Thymine Count

496355 bp

Guanine Count

723394 bp

Cytosine Count

722963 bp

Genome Length

2434428 bp

Protein-coding Genes

2659 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna polymerase iii subunit betaTX72_RS00005P52023+174 - 133140738.6
hypothetical proteinTX72_RS00010Not Available+1333 - 205827585.6
phosphoribosylformylglycinamidine synthase subunit purlTX72_RS00015Q7UA92+2103 - 440981459.8
amidophosphoribosyltransferaseTX72_RS00020Q55038+4468 - 589851704.8
dna topoisomerase (atp-hydrolyzing) subunit aTX72_RS00025P73077-5899 - 837389865.9
tetratricopeptide repeat proteinTX72_RS00030Not Available-8419 - 930032513.1
trna epoxyqueuosine(34) reductase quegTX72_RS00035Q3ANP3-9319 - 1028436118.9
hpsj family proteinTX72_RS00040Not Available+10334 - 1097822739.9
duf502 domain-containing proteinTX72_RS00045Not Available+11028 - 1176226787.8
transcription antitermination factor nusbTX72_RS00050Q8GIR7+11766 - 1240123249.8

Displaying genes 1 – 10 of 2713 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

158 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 158 metabolites