Photobacterium indicum

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium indicum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium indicum strain ATCC 19614 CFSAN065445_41, whole

Gene Summary

Adenine Count

1737574 bp

Thymine Count

1716949 bp

Guanine Count

1210009 bp

Cytosine Count

1241381 bp

Genome Length

5905913 bp

Protein-coding Genes

5075 genes

Non-Coding Genes

189 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
twin-arginine translocation pathway signalC9J47_01075Not AvailableNegative256260 - 25683220805.5
type vi secretion system tip protein vgrgC9J47_01080Not AvailableNegative256832 - 25882373262.6
type vi secretion proteinC9J47_01085Not AvailablePositive259508 - 26091152248.6
hcp1 family type vi secretion system effectorC9J47_01090Not AvailablePositive260941 - 26147418952.3
type vi secretion system contractile sheath small subunitC9J47_01095Not AvailablePositive261549 - 26205819134.5
type vi secretion system contractile sheath large subunitC9J47_01100Not AvailablePositive262058 - 26353654381.6
type vi secretion proteinC9J47_01105Not AvailablePositive263585 - 26494652328.1
type vi secretion system baseplate subunit tsseC9J47_01110Not AvailablePositive264943 - 26536815509.4
type vi secretion system baseplate subunit tssfC9J47_01115Not AvailablePositive265361 - 26713965904.3
type vi secretion protein vasb-1C9J47_01120Not AvailablePositive267121 - 26810437753.5

Displaying genes 271 – 280 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.