Pseudomonas syringae pv. apii

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. apii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. apii strain 1089_5 Pap1089_5_Contig_87,

Gene Summary

Adenine Count

1285271 bp

Thymine Count

1287952 bp

Guanine Count

1816673 bp

Cytosine Count

1804669 bp

Genome Length

6205080 bp

Protein-coding Genes

5551 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemolysin co-regulated type vi secretion system effectorALQ49_01623Not AvailableNegative615865 - 61636217569.8
protein impcALQ49_01624Not AvailableNegative616439 - 61792655039.3
hypothetical proteinALQ49_01625Not AvailableNegative617961 - 61851220254.1
protein tssj3ALQ49_01626Not AvailablePositive618713 - 61918617716.4
protein impjALQ49_01627Not AvailablePositive619240 - 62057148017.2
type vi secretion protein dotuALQ49_01628Not AvailablePositive620589 - 62135928876.6
type vi secretion protein icmfALQ49_01629Not AvailablePositive621356 - 625171141508.0
hypothetical proteinALQ49_01630Not AvailablePositive625168 - 62626841438.3
metallo-beta-lactamase super proteinALQ49_05107Not AvailableNegative626314 - 62727034267.8
lysr family transcriptional regulatorALQ49_05109Not AvailablePositive627244 - 62818233858.1

Displaying genes 571 – 580 of 5640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.