Methanothermobacter marburgensis str. Marburg

RodNon-motileObligate anaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanothermobacter

Description

Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) is a thermophilic methanogenic archaeon isolated in 1978 from anaerobic sewage sludge in Marburg, Germany. It possesses approximately 200 CDS required for the synthesis of the enzymes, coenzymes and prosthetic groups involved in CO2 reduction to methane and in coupling of this process with energy conservation. (Adapted from PMID: 20802048). (HAMAP: METTM)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanothermobacter
SpeciesMethanothermobacter marburgensis
StrainDSM 2133, Marburg

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobe
Optimal temperatureNot Available
Temperature rangeThermophilic
HabitatSludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceAutotroph - Lithoautotroph - Lithotroph
PathogenicityNo

Genome Summary

Methanothermobacter marburgensis str. Marburg, complete sequence.

Gene Summary

Adenine Count

418966 bp

Thymine Count

420458 bp

Guanine Count

397845 bp

Cytosine Count

397425 bp

Genome Length

1634695 bp

Protein-coding Genes

1733 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataMTBMA_RS00400Not AvailablePositive78135 - 7949048836.3
aaa family atpaseMTBMA_RS00405Not AvailablePositive79502 - 8097153347.4
atpase domain-containing proteinMTBMA_RS00410Not AvailableNegative81009 - 8173727067.4
3,4-dihydroxy-2-butanone-4-phosphate synthaseMTBMA_RS00415Not AvailableNegative81749 - 8242325214.1
duf120 domain-containing proteinMTBMA_RS00420Not AvailableNegative82452 - 8283814273.2
o-phosphoserine--trna ligaseMTBMA_RS00425Not AvailableNegative82843 - 8443860672.9
fumarate reductase (com/cob) subunit tfraMTBMA_RS00430Not AvailablePositive84664 - 8630760232.6
had family hydrolaseMTBMA_RS00435Not AvailableNegative86317 - 8698824475.3
amidohydrolase family proteinMTBMA_RS00440Not AvailableNegative86998 - 8828746320.2
atp phosphoribosyltransferaseMTBMA_RS00445Not AvailablePositive88448 - 8931131394.0

Displaying genes 81 – 90 of 3560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

36 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003138N(5)-formyl-5,6,7,8-tetrahydromethanopterinC31H42N6O17PChemical structure of N(5)-formyl-5,6,7,8-tetrahydromethanopterinNot available
Average801.677Da
Monoisotopic801.2360517Da
BASm00032005,6,7,8-tetrahydromethanopterinC30H45N6O16PChemical structure of 5,6,7,8-tetrahydromethanopterinNot available
Average776.6827Da
Monoisotopic776.2629659Da
BASm00032075-methyl-5,6,7,8-tetrahydromethanopterinC31H44N6O16PChemical structure of 5-methyl-5,6,7,8-tetrahydromethanopterinNot available
Average787.694Da
Monoisotopic787.2567871Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003438coenzyme M-coenzyme B heterodisulfideC13H22NO10PS3Chemical structure of coenzyme M-coenzyme B heterodisulfideNot available
Average479.47Da
Monoisotopic479.0165408Da
BASm0003686(2E,6E,10E)-geranylgeranyl diphosphateC20H33O7P2Chemical structure of (2E,6E,10E)-geranylgeranyl diphosphateNot available
Average447.426Da
Monoisotopic447.171798138Da
BASm0003763(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6PChemical structure of (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateNot available
Average285.1898Da
Monoisotopic285.0402236Da

Displaying 1–10 of 36 metabolites

Health Effects

No health effects information available for this bacterium.