Pseudomonas alabamensis

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas alabamensis is a Gram-negative, nonsporulating rod-shaped bacterium that functions as a chemoheterotroph, utilizing organic compounds as its energy source. This species is primarily found in soil environments, where it plays a role in the decomposition of organic matter, contributing to nutrient cycling within terrestrial ecosystems. As an obligate aerobe, Pseudomonas alabamensis requires oxygen for its metabolic processes, which further highlights its adaptation to aerobic habitats. The rod shape of Pseudomonas alabamensis is characteristic of many members of the Pseudomonas genus, facilitating motility and colonization in its soil habitat. The bacterium's ability to thrive in diverse soil conditions underscores its potential ecological versatility. While specific interactions with other soil microorganisms and plants have not been detailed, the presence of Pseudomonas alabamensis in soil suggests it may engage in complex ecological interactions that could influence soil health and fertility. In summary, Pseudomonas alabamensis exemplifies the diverse metabolic capabilities of soil-dwelling bacteria, contributing to ecological processes such as organic matter breakdown and nutrient availability, which are vital for sustaining soil ecosystems and promoting plant growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas alabamensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas alabamensis
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas alabamensis

Accession NumberNZ_CP013997.1

Gene Summary

Adenine Count

838535 bp

Thymine Count

841836 bp

Guanine Count

1523153 bp

Cytosine Count

1510835 bp

Genome Length

4714359 bp

Protein-coding Genes

3976 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Repressor ciAPT63_RS07130P69202-1605308 - 160597323960.9
Hypothetical proteinAPT63_RS07135Not Available+1606168 - 160675821603.8
Chemotaxis proteinAPT63_RS07140Not Available+1607005 - 160737613402.9
LipoproteinAPT63_RS07145Not Available+1607376 - 160769311820.1
Tail proteinAPT63_RS07150Not Available+1607835 - 160849422877.1
Hypothetical proteinAPT63_RS07155Not Available+1608504 - 160888713821.3
Hypothetical proteinAPT63_RS07160Not Available+1608905 - 160920110609.5
Tail tape measure proteinAPT63_RS07165O64330+1609205 - 161170987225.9
Minor tail protein mAPT63_RS07170Not Available+1611709 - 161204712308.5
Minor tail protein lAPT63_RS07175O64332+1612057 - 161280626666.2

Displaying genes 1 – 10 of 4121 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

593 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 593 metabolites