Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sulphurea |
| Strain | DSM 46092 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1043305 bp
Thymine Count
1054368 bp
Guanine Count
2395033 bp
Cytosine Count
2363584 bp
Genome Length
6856290 bp
Protein-coding Genes
5941 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| squalene-associated fad-dependent desaturase | ATK36_0398 | Not Available | Negative | 429229 - 430581 | 47487.9 |
| hypothetical protein | ATK36_0399 | Not Available | Negative | 430578 - 430682 | 3309.84 |
| farnesyl-diphosphate farnesyltransferase | ATK36_0400 | Not Available | Negative | 430679 - 431539 | 31353.5 |
| squalene synthase hpnc | ATK36_0401 | Not Available | Negative | 431536 - 432408 | 31485.5 |
| pucr-like helix-turn-helix protein | ATK36_0402 | Not Available | Positive | 432561 - 433778 | 44296.9 |
| short-subunit dehydrogenase | ATK36_0403 | Not Available | Negative | 433871 - 434620 | 25934.6 |
| uncharacterized protein duf3159 | ATK36_0404 | Not Available | Negative | 434620 - 435285 | 23897.1 |
| hypothetical protein | ATK36_0405 | Not Available | Positive | 435396 - 436373 | 32915.1 |
| udp-n-acetylglucosamine:lps n-acetylglucosamine transferase | ATK36_0406 | Not Available | Positive | 436506 - 438881 | 85432.6 |
| peptide-methionine (s)-s-oxide reductase | ATK36_0407 | Not Available | Negative | 439063 - 439569 | 18974.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.