Kocuria rhizophila str. RF

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Kocuria

Description

Kocuria rhizophila strain RF is a Gram-positive coccus that typically exists in various arrangements, including singles and tetrads. This microbe is classified as an aerobe, indicating its reliance on oxygen for metabolic processes. Its habitat is diverse, suggesting a level of ecological versatility that may allow it to thrive in multiple environments, potentially including soil, water, and plant-associated niches. The coccoid shape and aerobic nature of K. rhizophila str. RF may contribute to its survival strategies in oxygen-rich environments, which are commonly found in terrestrial ecosystems. Such adaptations could facilitate its role in nutrient cycling and interactions with other microorganisms in its habitat. The ability to exist in multiple arrangements, from solitary cells to pairs or clusters, might also enhance its resilience and adaptability to varying environmental conditions. Overall, Kocuria rhizophila str. RF exemplifies the ecological adaptability of certain Gram-positive cocci, highlighting the potential for diverse metabolic pathways and interactions in various habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusKocuria
SpeciesKocuria rhizophila
StrainRF

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Kocuria rhizophila str. RF
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Solanum lycopersicum
Cell arrangementSingles - Tetrads
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kocuria rhizophila strain RF contig90, whole genome shotgun

Gene Summary

Adenine Count

411175 bp

Thymine Count

406265 bp

Guanine Count

983976 bp

Cytosine Count

977090 bp

Genome Length

2778506 bp

Protein-coding Genes

2058 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s14IX41_01560Not AvailablePositive35799 - 3610411733.2
integration host factorIX41_01565Not AvailablePositive36179 - 364639852.76
hypothetical proteinIX41_01570Not AvailablePositive36622 - 3721220473.5
transcriptional regulatorIX41_01575Not AvailablePositive37327 - 3799222529.6
hypothetical proteinIX41_01580Not AvailablePositive38420 - 3920225993.3
peroxidaseIX41_01585Not AvailablePositive39192 - 4045745446.2
copper resistance protein copdIX41_01590Not AvailablePositive40543 - 4269377864.8
o-succinylbenzoate synthaseIX41_01595Not AvailableNegative42791 - 4380735525.5
hypothetical proteinIX41_01600Not AvailablePositive44000 - 4451218862.3
hypothetical proteinIX41_01605Not AvailablePositive44584 - 4489210787.1

Displaying genes 31 – 40 of 2058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.