Pseudomonas plecoglossicida str. DJ-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
StrainDJ-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida str. DJ-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain DJ-1 contig134, whole genome

Gene Summary

Adenine Count

1167781 bp

Thymine Count

1176646 bp

Guanine Count

1949078 bp

Cytosine Count

1932698 bp

Genome Length

6226203 bp

Protein-coding Genes

5639 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail fiber proteinCMV24_02250Not AvailablePositive484657 - 490920217070.0
hypothetical proteinCMV24_02255Not AvailablePositive490917 - 49129713982.5
hypothetical proteinCMV24_02260Not AvailablePositive491511 - 4917358016.28
Virion proteinCMV24_02265Not AvailablePositive491796 - 49223915959.1
Hypothetical proteinCMV24_02270Not AvailablePositive492236 - 49259812321.6
Hypothetical proteinCMV24_02275Not AvailablePositive492691 - 4929368781.89
Frg domain-containing proteinCMV24_02280Not AvailableNegative492966 - 49382632064.2
hypothetical proteinCMV24_02285Not AvailableNegative494204 - 49465916166.9
Hypothetical proteinCMV24_02290Not AvailableNegative494671 - 49515017024.8
AttrNot AvailableNot AvailablePositive495343 - 495371Not Available

Displaying genes 51 – 60 of 5853 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0004386N-acetyl-alpha-D-glucosaminyl-di-trans,octa-cis-undecaprenyl diphosphateC63H103NO12P2Chemical structure of N-acetyl-alpha-D-glucosaminyl-di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1128.461Da
Monoisotopic1127.696649Da
BASm0004885UDP-N-acetyl-alpha-D-mannosamineC17H25N3O17P2Chemical structure of UDP-N-acetyl-alpha-D-mannosamineNot available
Average605.34Da
Monoisotopic605.067017513Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.