Pseudomonas syringae pv. maculicola str. YM7930

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas syringae group genomosp. 3
Strain	No strain

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Arabidopsis, Nicotiana tabacum
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Pseudomonas syringae pv. maculicola strain YM7930

Adenine Count

1204129 bp

Thymine Count

1216047 bp

Guanine Count

1736655 bp

Cytosine Count

1727297 bp

Genome Length

5914337 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hrpr	AC507_0542	P37930	Positive	713226 - 714095	32302.3
hrps	AC507_0543	P37931	Positive	714141 - 715049	33181.3
hrpa	AC507_0544	Not Available	Positive	715143 - 715457	11237.1
harpin protein hrpz	AC507_0545	P35674	Positive	715511 - 716518	34383.3
type iii secretion protein hrpb	AC507_0546	Not Available	Positive	716546 - 716920	12845.3
hrcj	AC507_0547	P33209	Positive	716929 - 717738	29499.9
type iii secretion protein hrpd	AC507_0548	Not Available	Positive	717870 - 718271	15077.0
hrpe	AC507_0549	Not Available	Positive	718308 - 718889	21479.5
hrpf	AC507_0550	Not Available	Positive	718973 - 719197	7908.03
hrpg	AC507_0551	Not Available	Positive	719175 - 719615	15699.7

Displaying genes 751 – 760 of 5349 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000217	alpha-ribazoleC14H18N2O4	Not available	Average278.3037Da Monoisotopic278.126657074Da
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P	Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000254	3-hydroxy-2-methylpropanoateC4H7O3	Not available	Average103.098Da Monoisotopic103.0400677Da
BASm0000277	keto-L-sorboseC6H12O6	Not available	Average180.1559Da Monoisotopic180.0633881Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000399	(S)-allantoinC4H6N4O3	`97-59-6`	Average158.1154Da Monoisotopic158.0439901Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8	Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0000428	3-oxoadipateC6H6O5	Not available	Average158.11Da Monoisotopic158.022620453Da