Fibrobacter succinogenes subsp. succinogenes S85

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter succinogenes (strain ATCC 19169 / S85) is an anaerobic, cellulolytic Gram-negative bacterium. It is one of the three most predominant cellulolytic organisms in the rumen. F. succinogenes is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and F. succinogenes has devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose. In addition, the glycocalyx protects against protozoan attack of the bacterium as well as protease attack of the cellulase enzymes. Increasing cellulose degradation is an important goal in industrial processes. (Adaptated from: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=32617). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes
StrainS85

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fibrobacter succinogenes subsp. succinogenes S85
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Ovis aries
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Fibrobacter succinogenes subsp. succinogenes S85, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine-protein kinaseFSU_RS00055P9WI62Negative12996 - 1404539398.1
l-aspartate oxidaseFSU_RS00060Q8Z4K0Negative14068 - 1564857980.3
peptidylprolyl isomeraseFSU_RS00065Q81CB1Positive15807 - 1773871071.6
Trna-gluNot AvailableNot AvailablePositive17848 - 17920Not Available
hypothetical proteinFSU_RS00075Not AvailableNegative18166 - 1921839800.0
ompa family proteinFSU_RS00080P37726Positive19342 - 2004024998.5
s1 rna-binding domain-containing proteinFSU_RS00085Q49XJ2Negative20376 - 2120931176.7
duf5662 family proteinFSU_RS00090Not AvailableNegative21284 - 2182021189.8
adp-ribosylglycohydrolase family proteinFSU_RS00095Not AvailableNegative21859 - 2267729819.2
bspa family leucine-rich repeat surface proteinFSU_RS00100Not AvailablePositive22791 - 2387041302.3

Displaying genes 11 – 20 of 3178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.