Xanthomonas sacchari str. R1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas sacchari
StrainR1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas sacchari str. R1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

78784 bp

Thymine Count

76425 bp

Guanine Count

172621 bp

Cytosine Count

180823 bp

Genome Length

508653 bp

Protein-coding Genes

441 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diguanylate cyclase/phosphodiesteraseSB85_RS18630Not AvailableNegative98346 - 10049078866.1
phosphate/phosphite/phosphonate abc transporter substrate-binding proteinSB85_RS18635Not AvailableNegative100487 - 10137733452.3
zinc-binding dehydrogenaseSB85_RS18640Not AvailableNegative101546 - 10230327152.9
inositol monophosphatase family proteinSB85_RS18645Not AvailablePositive102422 - 10324930013.0
methyl-accepting chemotaxis proteinSB85_RS18650Not AvailablePositive103703 - 10585076806.4
protein translocase subunit secfSB85_RS18655Not AvailableNegative106316 - 10728135314.4
protein translocase subunit secdSB85_RS18660Not AvailableNegative107355 - 10919965913.5
preprotein translocase subunit yajcSB85_RS18665Not AvailableNegative109256 - 10960012059.1
trna guanosine(34) transglycosylase tgtSB85_RS18670Not AvailableNegative109963 - 11110841995.3
abc transporter atp-binding proteinSB85_RS18675Not AvailableNegative111344 - 11317367418.4

Displaying genes 81 – 90 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.