Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas sacchari |
| Strain | R1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence.
Gene Summary
Adenine Count
78784 bp
Thymine Count
76425 bp
Guanine Count
172621 bp
Cytosine Count
180823 bp
Genome Length
508653 bp
Protein-coding Genes
441 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | SB85_RS18580 | Not Available | Positive | 88508 - 89371 | 30079.1 |
| putative acyl-coa thioester hydrolase | SB85_RS18585 | Not Available | Positive | 89817 - 90998 | 39727.2 |
| squalene/phytoene synthase family protein | SB85_RS18590 | Not Available | Negative | 91194 - 91898 | 25575.7 |
| phosphoglycolate phosphatase | SB85_RS18595 | Not Available | Negative | 92091 - 92798 | 25300.6 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | SB85_RS18600 | Not Available | Negative | 92788 - 93525 | 26377.6 |
| trz/atz family hydrolase | SB85_RS18605 | Not Available | Negative | 93579 - 94913 | 48029.3 |
| tmem175 family protein | SB85_RS18610 | Not Available | Negative | 94939 - 95598 | 24268.2 |
| hypothetical protein | SB85_RS18615 | Not Available | Negative | 95764 - 96579 | 29410.8 |
| elongation factor p | SB85_RS18620 | Not Available | Negative | 96582 - 97148 | 20681.5 |
| ef-p beta-lysylation protein epmb | SB85_RS18625 | Not Available | Positive | 97248 - 98285 | 37320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.