Cylindrospermum stagnale PCC 7417

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Cylindrospermum

Description

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusCylindrospermum
SpeciesCylindrospermum stagnale
StrainPCC 7417

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cylindrospermum stagnale PCC 7417
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partial

Gene Summary

Adenine Count

127285 bp

Thymine Count

126359 bp

Guanine Count

89002 bp

Cytosine Count

88975 bp

Genome Length

431821 bp

Protein-coding Genes

330 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-grasp domain-containing proteinCYLST_RS30085Not AvailableNegative114217 - 11549147656.9
fkbm family methyltransferaseCYLST_RS30090Not AvailableNegative115784 - 11656029863.5
methyltransferase domain-containing proteinCYLST_RS30095Not AvailableNegative116560 - 11730028261.7
site-specific integraseCYLST_RS30100Not AvailableNegative118658 - 11964136659.3
hypothetical proteinCYLST_RS30105Not AvailableNegative119861 - 12028615974.4
para family proteinCYLST_RS30110Not AvailableNegative120311 - 12116230762.4
rpn family recombination-promoting nuclease/putative transposaseCYLST_RS30115Not AvailableNegative121598 - 12241331600.9
hypothetical proteinCYLST_RS30120Not AvailablePositive123115 - 12370822689.8
photosystem ii q(b) proteinCYLST_RS30125Not AvailableNegative124045 - 12512739552.6
hypothetical proteinCYLST_RS30130Not AvailableNegative125555 - 12760075767.2

Displaying genes 81 – 90 of 6569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

466 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 466 metabolites

Health Effects

No health effects information available for this bacterium.