Actinomyces graevenitzii

Gram-positiveFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces graevenitzii is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, categorized as a Chemoheterotroph, and can be found in various body sites, including the oral cavity, gastrointestinal tract, and urogenital tract, across different species, and is typically an Obligate Anaerobe. The Gram-positive characteristic is due to the presence of a thick peptidoglycan layer in its cell wall, which retains the crystal violet stain during the Gram staining procedure. The rod shape of A. graevenitzii allows it to fit into tight spaces and colonize various environments. As a mesophile, it grows best in temperatures between 20-40°C, which is suitable for its presence in the human body.As a Chemoheterotroph, A. graevenitzii relies on chemical compounds for energy and organic compounds for carbon, which it obtains from its environment. This characteristic allows it to thrive in environments with abundant organic matter. The presence of A. graevenitzii in various body sites suggests its ability to adapt to different environments and host-microbe interactions. Its classification as an Obligate Anaerobe indicates that it requires the absence of oxygen to grow, which is consistent with its presence in areas with low oxygen levels, such as the oral cavity and gastrointestinal tract. A. graevenitzii has been implicated in various human infections, including actinomycosis, an rare infectious bacterial disease that can affect the mouth, digestive tract, and other parts of the body. The microbe's ability to form biofilms and its resistance to certain antibiotics make it a challenging pathogen to treat. Recent studies have also explored the potential role of A. graevenitzii in the development of certain types of cancer, highlighting the need for further research into its pathogenic mechanisms and interactions with the human host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces graevenitzii
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces graevenitzii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitattongue dorsum
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces graevenitzii strain UMB0286 ERR1203671.17957_1_83.20,

Gene Summary

Adenine Count

442646 bp

Thymine Count

446527 bp

Guanine Count

605702 bp

Cytosine Count

611206 bp

Genome Length

2107861 bp

Protein-coding Genes

1701 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive1328635 - 1328710Not Available
imp dehydrogenaseCJ186_05730Not AvailablePositive1328892 - 132992035860.2
uracil-dna glycosylaseCJ186_05735Not AvailableNegative1329921 - 133059523828.7
hypothetical proteinCJ186_05740Not AvailablePositive1330664 - 133129321699.4
chaperonin groelCJ186_05745Not AvailablePositive1331536 - 133315556854.9
hypothetical proteinCJ186_05750Not AvailablePositive1333342 - 133478150943.7
wxg100 family type vii secretion targetCJ186_05755Not AvailableNegative1334778 - 133506810252.9
sensor histidine kinaseCJ186_05765Not AvailableNegative1336643 - 133819056035.2
dna-binding response regulatorCJ186_05770Not AvailableNegative1338190 - 133892427618.2
nyn domain-containing proteinCJ186_05775Not AvailableNegative1339006 - 133957521211.5

Displaying genes 1131 – 1140 of 1758 in total

Metabolites

301 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 301 metabolites

Health Effects

No health effects information available for this bacterium.