Actinomyces graevenitzii

Gram-positiveFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces graevenitzii is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, categorized as a Chemoheterotroph, and can be found in various body sites, including the oral cavity, gastrointestinal tract, and urogenital tract, across different species, and is typically an Obligate Anaerobe. The Gram-positive characteristic is due to the presence of a thick peptidoglycan layer in its cell wall, which retains the crystal violet stain during the Gram staining procedure. The rod shape of A. graevenitzii allows it to fit into tight spaces and colonize various environments. As a mesophile, it grows best in temperatures between 20-40°C, which is suitable for its presence in the human body.As a Chemoheterotroph, A. graevenitzii relies on chemical compounds for energy and organic compounds for carbon, which it obtains from its environment. This characteristic allows it to thrive in environments with abundant organic matter. The presence of A. graevenitzii in various body sites suggests its ability to adapt to different environments and host-microbe interactions. Its classification as an Obligate Anaerobe indicates that it requires the absence of oxygen to grow, which is consistent with its presence in areas with low oxygen levels, such as the oral cavity and gastrointestinal tract. A. graevenitzii has been implicated in various human infections, including actinomycosis, an rare infectious bacterial disease that can affect the mouth, digestive tract, and other parts of the body. The microbe's ability to form biofilms and its resistance to certain antibiotics make it a challenging pathogen to treat. Recent studies have also explored the potential role of A. graevenitzii in the development of certain types of cancer, highlighting the need for further research into its pathogenic mechanisms and interactions with the human host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces graevenitzii
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces graevenitzii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitattongue dorsum
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces graevenitzii


Gene Summary

Adenine Count

442646 bp

Thymine Count

446527 bp

Guanine Count

605702 bp

Cytosine Count

611206 bp

Genome Length

2107861 bp

Protein-coding Genes

1701 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s18CJ186_05525Not AvailablePositive1281996 - 12822328762.0
50s ribosomal protein l9CJ186_05530Not AvailablePositive1282248 - 128270316071.4
replicative dna helicaseCJ186_05535Not AvailableNegative1282917 - 128429350773.6
mate family efflux transporterCJ186_05540Not AvailablePositive1284844 - 128640052403.4
hydroxymethylpyrimidine/phosphomethylpyrimidine kinaseCJ186_05545Not AvailableNegative1287216 - 128802827862.3
l-serine ammonia-lyaseCJ186_05550Not AvailablePositive1288294 - 128994657807.1
dna-binding response regulatorCJ186_05555Not AvailablePositive1289993 - 129073627431.8
two-component sensor histidine kinaseCJ186_05560Not AvailablePositive1290782 - 129248560970.3
glutaredoxin-like protein nrdhCJ186_05565Not AvailablePositive1293098 - 12933468659.36
class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdiCJ186_05570Not AvailablePositive1293461 - 129386214672.9

Displaying genes 1091 – 1100 of 1758 in total

Metabolites

301 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 301 metabolites

Health Effects

No health effects information available for this bacterium.