Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | ALO35_03657 | Not Available | Negative | 693375 - 694241 | 30601.1 |
| Hypothetical protein | ALO35_102580 | Not Available | Negative | 694241 - 694543 | 10971.1 |
| Central tail fiber j | ALO35_03658 | P03749 | Negative | 694545 - 698273 | 133931.0 |
| Tail assembly protein | ALO35_03659 | O64334 | Negative | 698330 - 698917 | 20271.4 |
| Phage tail assembly protein | ALO35_03660 | Not Available | Negative | 698914 - 699696 | 29125.3 |
| protein l | ALO35_05768 | Not Available | Positive | 699750 - 700814 | 38875.3 |
| uncharacterized protein | ALO35_03663 | Not Available | Positive | 700896 - 701126 | 8351.06 |
| Minor tail protein m | ALO35_03664 | Not Available | Negative | 701261 - 701605 | 12485.5 |
| Tail length tape-measure protein 1 | ALO35_03665 | Not Available | Negative | 701605 - 701949 | 11912.0 |
| uncharacterized protein | ALO35_03666 | Not Available | Positive | 703661 - 704167 | 17080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
