Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | ALO35_03487 | E1V8J1 | Positive | 935090 - 936358 | 45136.6 |
| succinylglutamate desuccinylase/aspartoacylase family protein | ALO35_05442 | Not Available | Negative | 936396 - 937026 | 23359.7 |
| putative lipid a biosynthesis lauroyl acyltransferase | ALO35_00750 | Not Available | Negative | 937092 - 937979 | 32593.0 |
| dna-3-methyladenine glycosidase i | ALO35_00751 | P05100 | Negative | 938018 - 938569 | 20924.4 |
| glycyl-trna synthetase subunit alpha | ALO35_04747 | Q88B36 | Positive | 938590 - 939597 | 38361.4 |
| glycine--trna ligase beta subunit | ALO35_100121 | Q48QJ1 | Positive | 939594 - 941648 | 74856.9 |
| d,d-heptose 1,7-bisphosphate phosphatase | ALO35_00752 | Not Available | Positive | 941662 - 941985 | 11578.0 |
| d,d-heptose 1,7-bisphosphate phosphatase | ALO35_00753 | Q88RS0 | Positive | 942007 - 942204 | 6736.15 |
| phospholipid/glycerol acyltransferase | ALO35_00754 | O35083 | Positive | 942270 - 943040 | 28690.0 |
| oxidoreductase, fad-binding | ALO35_100622 | P33642 | Negative | 943627 - 944982 | 48000.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
