Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO35_101997 | Not Available | Negative | 927574 - 927768 | 6904.54 |
| dnaj domain protein | ALO35_03478 | Not Available | Positive | 928203 - 928757 | 19767.8 |
| sporulation related repeat protein | ALO35_03479 | Not Available | Negative | 928896 - 929591 | 24643.8 |
| arginyl-trna synthetase | ALO35_03480 | Q48PI2 | Negative | 929593 - 930111 | 19012.7 |
| arginine--trna ligase | ALO35_03481 | Not Available | Negative | 930137 - 931354 | 44246.9 |
| primosome assembly protein pria | ALO35_03482 | P44647 | Negative | 931452 - 932000 | 19818.9 |
| primosome assembly protein pria | ALO35_03483 | P17888 | Negative | 931960 - 933231 | 46078.3 |
| helicase pria essential for oric/dnaa-independent dna replication | ALO35_03484 | Not Available | Negative | 933258 - 933698 | 16191.7 |
| 50s ribosomal protein l31 | ALO35_03485 | Q48PI0 | Positive | 933868 - 934089 | 7880.48 |
| nuclease | ALO35_03486 | Not Available | Positive | 934103 - 934906 | 28785.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
