Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major outer membrane lipoprotein | ALO35_100045 | P11221 | Positive | 919090 - 919356 | 9387.05 |
| hypothetical protein | ALO35_102996 | Not Available | Positive | 919506 - 919649 | 5542.73 |
| nadp oxidoreductase coenzyme -dependent | ALO35_101737 | Not Available | Negative | 920182 - 920928 | 26805.9 |
| transcriptional regulator | ALO35_03475 | Q9Z9W1 | Positive | 921053 - 921451 | 14962.2 |
| cysteine protease | ALO35_102681 | Q52430 | Negative | 921857 - 922750 | 32467.8 |
| uncharacterized protein | ALO35_03476 | Not Available | Positive | 923032 - 923742 | 25618.0 |
| hypothetical protein | ALO35_102759 | Not Available | Positive | 923906 - 924049 | 5246.93 |
| ultraviolet light resistance protein a | ALO35_03477 | Not Available | Negative | 925379 - 925645 | 9680.74 |
| hypothetical protein | ALO35_103221 | Not Available | Positive | 926170 - 926349 | 6619.94 |
| Trna-thr | Not Available | Not Available | Positive | 926903 - 926978 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
