Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp pyrophospho kinase | ALO35_101465 | P0AG22 | Negative | 911326 - 911877 | 20199.7 |
| gtp pyrophospho kinase | ALO35_101212 | P55133 | Negative | 911817 - 913379 | 58585.4 |
| hypothetical protein | ALO35_101049 | Not Available | Positive | 913457 - 913705 | 9226.19 |
| 23s rrna -methyltransferase rlmd | ALO35_02211 | Q48FH7 | Negative | 913685 - 914167 | 17599.4 |
| 23s rrna -methyltransferase rlmd | ALO35_02212 | Not Available | Negative | 914175 - 915011 | 30062.3 |
| cysteine synthase | ALO35_02213 | Q9I526 | Negative | 915011 - 915952 | 33859.4 |
| response regulator, sensor histidine kinase component gacs | ALO35_05100 | P48027 | Positive | 916164 - 916818 | 23518.0 |
| hypothetical protein | ALO35_05310 | Not Available | Negative | 916819 - 916965 | 5239.48 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ALO35_03013 | P0A1B6 | Positive | 917137 - 918249 | 40311.2 |
| uncharacterized protein | ALO35_03014 | Not Available | Negative | 918344 - 918631 | 10708.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
