Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate transporter, madm subunit | ALO35_01747 | Not Available | Positive | 892720 - 893484 | 25926.6 |
| malonate utilization transcriptional regulator | ALO35_100201 | P52684 | Negative | 893495 - 894496 | 37561.5 |
| hemolysin iii | ALO35_01748 | P54176 | Positive | 894552 - 895190 | 23448.5 |
| ribosomal rna small subunit methyltransferase e | ALO35_04975 | Not Available | Negative | 895212 - 895403 | 6600.79 |
| ribosomal rna small subunit methyltransferase e | ALO35_01749 | P37995 | Negative | 895390 - 895935 | 20023.1 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | ALO35_04976 | Not Available | Negative | 896055 - 896939 | 32589.9 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | ALO35_04977 | P22805 | Negative | 896888 - 897451 | 19860.8 |
| unknown protein sequence | ALO35_05748 | Not Available | Negative | 897823 - 898779 | 34565.5 |
| hypothetical protein | ALO35_102491 | Not Available | Positive | 899484 - 899678 | 7390.54 |
| cytochrome family protein | ALO35_01751 | P75925 | Positive | 899829 - 900377 | 20101.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
