Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO35_200113 | Not Available | Negative | 885119 - 885670 | 19839.5 |
| hypothetical protein | ALO35_200037 | Not Available | Negative | 885767 - 885997 | 8387.42 |
| hypothetical protein | ALO35_200153 | Not Available | Negative | 886261 - 886629 | 13483.3 |
| hypothetical protein | ALO35_200006 | Q8VMM5 | Negative | 886814 - 887362 | 20969.2 |
| putative atpase | ALO35_05448 | P64613 | Negative | 887532 - 887833 | 11764.3 |
| sulfate permease family protein | ALO35_03396 | Not Available | Negative | 887876 - 888376 | 18353.5 |
| na+/proline, na+/panthothenate symporter | ALO35_05285 | P42964 | Negative | 888378 - 889128 | 25920.2 |
| hypothetical protein | ALO35_02937 | Q48P81 | Positive | 890135 - 891598 | 54998.1 |
| malonyl coa-acyl carrier protein transacylase | ALO35_01745 | P43712 | Positive | 891683 - 892220 | 19339.5 |
| malonate transporter, madl subunit | ALO35_01746 | Not Available | Positive | 892290 - 892718 | 14534.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
