Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_01323 | Not Available | Positive | 866787 - 866969 | 6721.02 |
| sulfate-binding protein | ALO35_01324 | P0AG78 | Positive | 867120 - 868130 | 36968.7 |
| sulfate abc transporter permease cyst | ALO35_01325 | P41032 | Positive | 868235 - 869056 | 29591.4 |
| sulfate abc transporter, permease protein cysw | ALO35_01326 | P0AEB1 | Positive | 869070 - 869942 | 31539.2 |
| sulfate/thiosulfate import atp-binding protein cysa | ALO35_01327 | Q88AS5 | Positive | 869945 - 870925 | 36798.1 |
| abc-type transporter, integral membrane subunit | ALO35_05691 | Not Available | Positive | 870975 - 871135 | 5593.05 |
| branched-chain amino acid abc transporter permease | ALO35_04390 | Not Available | Positive | 871157 - 872224 | 38940.7 |
| uncharacterized protein | ALO35_04391 | Not Available | Positive | 872272 - 873603 | 48130.5 |
| branched-chain amino acid abc transporter atp-binding protein | ALO35_04392 | Not Available | Positive | 873609 - 874388 | 28130.0 |
| acyl-coa dehydrogenase family protein | ALO35_04393 | A0A0C6DRW4 | Positive | 874528 - 875787 | 45113.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
