Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl aminopeptidase family, clan mh | ALO35_00816 | O07603 | Negative | 853237 - 854361 | 39974.2 |
| ribosomal-protein-s18p-alanine acetyltransferase | ALO35_00817 | O86109 | Negative | 854443 - 856191 | 63248.4 |
| asparagine synthetase | ALO35_00818 | Q58456 | Negative | 856192 - 857229 | 38251.5 |
| asparagine synthetase | ALO35_00819 | P54420 | Negative | 857273 - 857974 | 25419.6 |
| uncharacterized protein | ALO35_00820 | Not Available | Positive | 858258 - 858440 | 6810.45 |
| uncharacterized protein | ALO35_00821 | Not Available | Positive | 858464 - 858880 | 14862.9 |
| amino acid adenylation | ALO35_05495 | Not Available | Negative | 861106 - 862133 | 37609.1 |
| pas:ggdef protein | ALO35_01320 | A0A0H3AFM6 | Negative | 862194 - 863192 | 37341.1 |
| fatty acid desaturase | ALO35_01321 | Not Available | Negative | 863322 - 864506 | 45177.8 |
| sensory box/ggdef domain/eal domain protein | ALO35_01322 | Not Available | Positive | 864662 - 866590 | 71296.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
