Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ALO35_100483 | Not Available | Positive | 15207 - 16196 | 35505.1 |
| nadh-quinone oxidoreductase subunit n | ALO35_02421 | A4XV14 | Negative | 16202 - 16939 | 24842.1 |
| nadh-quinone oxidoreductase subunit n | ALO35_02422 | Q9I0I9 | Negative | 16890 - 17717 | 28812.0 |
| nadh dehydrogenase i chain m | ALO35_05146 | Q9I0J0 | Negative | 17725 - 19269 | 56130.3 |
| nadh:ubiquinone oxidoreductase subunit l | ALO35_05148 | Q9I0J1 | Negative | 19297 - 21294 | 71770.6 |
| nadh-quinone oxidoreductase subunit k | ALO35_02425 | Q48H45 | Negative | 21147 - 21455 | 11005.0 |
| nadh:ubiquinone oxidoreductase subunit j | ALO35_02426 | Q9I0J3 | Negative | 21452 - 21961 | 17965.6 |
| nadh-quinone oxidoreductase subunit i | ALO35_02427 | Q48H47 | Negative | 21972 - 22520 | 20505.7 |
| nadh-quinone oxidoreductase subunit h | ALO35_02428 | Q48H48 | Negative | 22532 - 23539 | 37459.5 |
| nadh-quinone oxidoreductase | ALO35_05150 | Q87ZQ4 | Negative | 23536 - 26256 | 98434.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
