Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine synthase | ALO35_04609 | Q48CH3 | Positive | 846019 - 846414 | 13777.0 |
| hypothetical protein | ALO35_102578 | Not Available | Negative | 846566 - 846733 | 5813.91 |
| glycine betaine-binding protein | ALO35_00809 | Q9RR44 | Positive | 846959 - 847897 | 33856.9 |
| membrane protein | ALO35_00810 | P0AF54 | Positive | 848134 - 848445 | 11430.1 |
| acetate permease | ALO35_00811 | A1JIK1 | Positive | 848442 - 850100 | 58928.4 |
| uncharacterized protein | ALO35_00813 | Not Available | Positive | 850655 - 851032 | 13862.4 |
| oxidoreductase, short chain dehydrogenase/reductase family | ALO35_00814 | P66778 | Positive | 851136 - 851951 | 29622.0 |
| membrane protein | ALO35_100427 | Q48LG7 | Positive | 852015 - 852457 | 16165.2 |
| carbon storage regulator -like protein | ALO35_100328 | Q886F0 | Positive | 852594 - 852821 | 8335.29 |
| uncharacterized protein | ALO35_00815 | Q48LG4 | Negative | 852869 - 853096 | 8778.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
