Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_00243 | Not Available | Positive | 837228 - 837638 | 15084.6 |
| uncharacterized protein | ALO35_00244 | Not Available | Positive | 837694 - 838113 | 15030.2 |
| fructose-bisphosphate aldolase, s ii | ALO35_04607 | Q9I5Y1 | Negative | 838284 - 839414 | 41086.2 |
| putative lipoprotein | ALO35_00246 | Not Available | Negative | 839463 - 839789 | 11917.0 |
| hypothetical protein | ALO35_100453 | Not Available | Negative | 839842 - 840039 | 6787.04 |
| putative lipoprotein | ALO35_00247 | Not Available | Negative | 840125 - 840373 | 9079.85 |
| phosphoglycerate kinase | ALO35_00248 | Q48CH7 | Negative | 840383 - 841552 | 40482.9 |
| d-erythrose-4-phosphate dehydrogenase | ALO35_00249 | A8APE1 | Negative | 841569 - 842612 | 38344.9 |
| transketolase | ALO35_04608 | Q8D6H8 | Negative | 842736 - 844814 | 75459.2 |
| transcriptional regulator, arsr family | ALO35_00251 | Not Available | Positive | 844993 - 845988 | 36222.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
