Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unknown protein sequence | ALO35_00234 | Not Available | Positive | 824247 - 824459 | 7397.09 |
| rieske region | ALO35_00235 | P0ABR8 | Positive | 824528 - 825826 | 49110.7 |
| glycosyl hydrolase family protein | ALO35_00236 | Q838S2 | Positive | 826030 - 828438 | 88102.0 |
| electron transfer flavoprotein, subunit beta | ALO35_00237 | Not Available | Negative | 829578 - 830078 | 17120.3 |
| electron transfer flavoprotein, alpha subunit | ALO35_00238 | P52039 | Negative | 830068 - 830712 | 21608.8 |
| iron-sulfur cluster-binding protein | ALO35_00239 | Q0AZ32 | Negative | 831240 - 833222 | 71818.5 |
| nadh:flavin oxidoreductase/nadh oxidase family protein | ALO35_04605 | O87278 | Negative | 833332 - 835407 | 76127.4 |
| uncharacterized protein | ALO35_00241 | Not Available | Negative | 835408 - 835938 | 19658.5 |
| renal dipeptidase family protein | ALO35_00242 | E9CV02 | Negative | 836022 - 836999 | 35943.1 |
| hypothetical protein | ALO35_100986 | Not Available | Positive | 836979 - 837140 | 5441.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
