Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin oxidoreductase | ALO35_00227 | Not Available | Negative | 817420 - 817710 | 10329.3 |
| putative fumarate hydratase, s i | ALO35_00228 | P40720 | Positive | 817890 - 819413 | 54871.5 |
| uncharacterized protein | ALO35_00229 | Not Available | Positive | 819735 - 820268 | 19220.5 |
| putative cytoplasmic protein | ALO35_04603 | Not Available | Positive | 820320 - 820622 | 11227.4 |
| uncharacterized protein | ALO35_00230 | Not Available | Positive | 820821 - 821261 | 16456.5 |
| uncharacterized protein | ALO35_00231 | Not Available | Positive | 821284 - 821724 | 16472.8 |
| uncharacterized protein | ALO35_00232 | Not Available | Positive | 822292 - 822522 | 8531.4 |
| uncharacterized protein | ALO35_00233 | Not Available | Positive | 822646 - 822912 | 9241.12 |
| flavodoxin reductase family 1 | ALO35_102304 | P68641 | Negative | 823104 - 823517 | 14499.2 |
| oxidoreductase | ALO35_04604 | Q0SJK8 | Negative | 823459 - 824214 | 27648.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
