Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj-like protein djla | ALO35_02913 | Not Available | Positive | 811708 - 811920 | 7339.1 |
| dnaj-like protein djla | ALO35_101462 | Q7AHS5 | Positive | 812234 - 812476 | 8918.69 |
| uncharacterized protein | ALO35_02914 | Not Available | Negative | 812509 - 813090 | 20796.6 |
| uncharacterized protein | ALO35_02915 | Not Available | Negative | 813126 - 813515 | 13735.2 |
| sensory box histidine kinase | ALO35_05275 | Not Available | Positive | 813582 - 814191 | 22275.0 |
| hypothetical protein | ALO35_200145 | Not Available | Positive | 814356 - 814922 | 18749.9 |
| hypothetical protein | ALO35_200011 | Q70LM5 | Negative | 814853 - 815317 | 16205.5 |
| hypothetical protein | ALO35_03382 | Not Available | Negative | 815675 - 815922 | 9558.11 |
| putative rhs-related transmembrane protein | ALO35_03308 | Not Available | Positive | 815926 - 816363 | 15875.0 |
| uncharacterized protein | ALO35_03309 | Not Available | Positive | 816373 - 816888 | 19889.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
